Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium and cobalt efflux protein corc | DIZ31_14450 | Not Available | Positive | 2823411 - 2824289 | 33300.4 |
| apolipoprotein n-acyltransferase | DIZ31_14455 | Not Available | Positive | 2824314 - 2825852 | 57098.2 |
| rhomboid family intramembrane serine protease | DIZ31_14460 | Not Available | Negative | 2825979 - 2827856 | 67584.7 |
| glutamate/aspartate abc transporter substrate-binding protein | DIZ31_14465 | Not Available | Positive | 2828310 - 2829218 | 33362.9 |
| glutamate abc transporter permease | DIZ31_14470 | Not Available | Positive | 2829388 - 2830128 | 27504.3 |
| glutamate abc transporter permease | DIZ31_14475 | Not Available | Positive | 2830128 - 2830802 | 24916.2 |
| glutamate/aspartate transport atp-binding protein gltl | DIZ31_14480 | Not Available | Positive | 2830802 - 2831527 | 26674.7 |
| pyrimidine-specific ribonucleoside hydrolase riha | DIZ31_14485 | Not Available | Positive | 2831645 - 2832580 | 33823.9 |
| molecular chaperone hscc | DIZ31_14490 | Not Available | Positive | 2832664 - 2834334 | 62028.9 |
| molecular chaperone dnaj | DIZ31_14495 | Not Available | Negative | 2834394 - 2835845 | 55866.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





