Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aliphatic sulfonate abc transporter permease ssuc | DIZ31_14290 | Not Available | Positive | 2793471 - 2794262 | 29047.4 |
| aliphatic sulfonates abc transporter atp-binding protein | DIZ31_14295 | Not Available | Positive | 2794259 - 2795026 | 27785.9 |
| aminopeptidase n | DIZ31_14300 | Not Available | Negative | 2795069 - 2797681 | 98928.2 |
| nicotinate phosphoribosyltransferase | DIZ31_14305 | Not Available | Positive | 2797947 - 2799149 | 45940.8 |
| asparagine--trna ligase | DIZ31_14310 | Not Available | Positive | 2799318 - 2800718 | 52572.3 |
| porin ompf | DIZ31_14315 | Not Available | Positive | 2801321 - 2802409 | 39353.4 |
| hypothetical protein | DIZ31_14320 | Not Available | Negative | 2802425 - 2802607 | 7127.82 |
| aspartate aminotransferase | DIZ31_14325 | Not Available | Positive | 2802594 - 2803784 | 43571.7 |
| mbl fold metallo-hydrolase | DIZ31_14330 | Not Available | Negative | 2803834 - 2804481 | 23742.4 |
| duf882 domain-containing protein | DIZ31_14335 | Not Available | Negative | 2804508 - 2805056 | 20355.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





