Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | DIZ31_14190 | Not Available | Negative | 2773689 - 2774318 | 24164.4 |
| cell division inhibitor sula | DIZ31_14195 | Not Available | Positive | 2774537 - 2775046 | 18744.4 |
| hypothetical protein | DIZ31_14200 | Not Available | Negative | 2775030 - 2775248 | 8241.19 |
| porin ompa | DIZ31_14205 | Not Available | Positive | 2775402 - 2776454 | 37495.2 |
| macrodomain ter protein | DIZ31_14210 | Not Available | Negative | 2776530 - 2776982 | 17724.4 |
| lon protease | DIZ31_14215 | Not Available | Positive | 2777168 - 2778928 | 65809.3 |
| beta-hydroxydecanoyl-acp dehydratase | DIZ31_14220 | Not Available | Positive | 2778997 - 2779515 | 18997.2 |
| ribosome modulation factor | DIZ31_14225 | Not Available | Negative | 2779585 - 2779752 | 6507.88 |
| membrane integrity-associated transporter subunit pqic | DIZ31_14230 | Not Available | Negative | 2780008 - 2780571 | 20704.7 |
| intermembrane transport protein pqib | DIZ31_14235 | Not Available | Negative | 2780568 - 2782208 | 60497.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





