Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase tuse | DIZ31_14140 | Not Available | Positive | 2764788 - 2765117 | 12425.0 |
| acylphosphatase | DIZ31_14145 | Not Available | Negative | 2765114 - 2765392 | 10272.3 |
| ribosomal rna large subunit methyltransferase i | DIZ31_14150 | Not Available | Positive | 2765487 - 2766677 | 44357.5 |
| heat-shock protein hspq | DIZ31_14155 | Not Available | Positive | 2766735 - 2767052 | 11779.9 |
| coa-binding protein | DIZ31_14160 | Not Available | Negative | 2767097 - 2767510 | 14702.0 |
| duf2057 domain-containing protein | DIZ31_14165 | Not Available | Positive | 2767683 - 2768345 | 24595.5 |
| methylglyoxal synthase | DIZ31_14170 | Not Available | Positive | 2768441 - 2768899 | 16935.6 |
| dna helicase iv | DIZ31_14175 | Not Available | Negative | 2768931 - 2770985 | 77938.5 |
| yccf domain-containing protein | DIZ31_14180 | Not Available | Positive | 2771108 - 2771554 | 16276.3 |
| tigr01666 family membrane protein | DIZ31_14185 | Not Available | Positive | 2771573 - 2773726 | 81657.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





