Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Holin lysis protein s | DIZ31_21100 | Not Available | Positive | 4057185 - 4057400 | 8054.78 |
| Hypothetical protein | DIZ31_21105 | Not Available | Positive | 4057405 - 4057749 | 12854.5 |
| hypothetical protein | DIZ31_21110 | Not Available | Negative | 4057715 - 4057987 | 10232.9 |
| Putative r protein | DIZ31_21115 | Not Available | Positive | 4058093 - 4058626 | 19589.6 |
| Hypothetical protein | DIZ31_21120 | Not Available | Positive | 4058704 - 4058916 | 8202.3 |
| hypothetical protein | DIZ31_21125 | Not Available | Positive | 4059181 - 4059267 | 3258.21 |
| Rz lysis protein | DIZ31_21130 | Not Available | Positive | 4059269 - 4059763 | 18450.2 |
| hypothetical protein | DIZ31_21135 | Not Available | Positive | 4059760 - 4059975 | 8028.95 |
| Hypothetical protein | DIZ31_21140 | Not Available | Positive | 4059972 - 4060136 | 5938.06 |
| Hypothetical protein | DIZ31_21145 | Not Available | Negative | 4060174 - 4060374 | 7620.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





