Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-heme ferritin | DIZ31_13515 | Not Available | Positive | 2651427 - 2651924 | 19424.9 |
| duf2492 domain-containing protein | DIZ31_13520 | Not Available | Negative | 2651962 - 2652201 | 8644.22 |
| tyrosine transporter | DIZ31_13525 | Not Available | Positive | 2652392 - 2653603 | 42835.8 |
| dna-binding response regulator | DIZ31_13855 | Not Available | Negative | 2700013 - 2700669 | 23864.1 |
| hth-type transcriptional regulator galr | DIZ31_13860 | Not Available | Positive | 2701520 - 2702551 | 37136.3 |
| diaminopimelate decarboxylase | DIZ31_13865 | Not Available | Negative | 2702558 - 2703820 | 46178.1 |
| lysr family transcriptional regulator | DIZ31_13870 | Not Available | Positive | 2703942 - 2704877 | 34424.7 |
| aspartate/glutamate racemase | DIZ31_13875 | Not Available | Negative | 2704864 - 2705556 | 25281.4 |
| sugar porter family mfs transporter | DIZ31_13880 | Not Available | Negative | 2705685 - 2707103 | 51697.7 |
| 2-deoxy-d-gluconate 3-dehydrogenase | DIZ31_13885 | Not Available | Negative | 2707418 - 2708179 | 27056.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





