Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose abc transporter substrate-binding protein | DIZ31_13360 | Not Available | Negative | 2625896 - 2626894 | 35714.5 |
| hth-type transcriptional regulator gals | DIZ31_13365 | Not Available | Negative | 2627174 - 2628214 | 37447.1 |
| hypothetical protein | DIZ31_13370 | Not Available | Positive | 2628204 - 2628407 | 7320.71 |
| duf418 family protein | DIZ31_13375 | Not Available | Negative | 2628356 - 2629513 | 43492.3 |
| gtp cyclohydrolase i fole | DIZ31_13380 | Not Available | Negative | 2629530 - 2630198 | 24832.1 |
| phenylalanyl-trna synthetase subunit beta | DIZ31_13385 | Not Available | Negative | 2630182 - 2630295 | 3947.66 |
| hypothetical protein | DIZ31_13390 | Not Available | Positive | 2630352 - 2630528 | 6430.51 |
| s-formylglutathione hydrolase yeig | DIZ31_13395 | Not Available | Positive | 2630456 - 2631292 | 31260.8 |
| catecholate siderophore receptor cira | DIZ31_13400 | Not Available | Negative | 2631324 - 2633315 | 73885.5 |
| amino acid permease | DIZ31_13410 | Not Available | Negative | 2633607 - 2635076 | 53536.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





