Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux rnd transporter permease subunit | DIZ31_12710 | Not Available | Positive | 2487917 - 2491030 | 111550.0 |
| hypothetical protein | DIZ31_12715 | Not Available | Negative | 2490967 - 2491248 | 10523.2 |
| transcriptional regulator | DIZ31_12720 | Not Available | Negative | 2491393 - 2492121 | 28114.2 |
| transcriptional regulator | DIZ31_12725 | Not Available | Negative | 2492490 - 2493314 | 31308.3 |
| glutamate decarboxylase | DIZ31_12730 | Not Available | Negative | 2493682 - 2495082 | 52700.1 |
| cytochrome-c peroxidase | DIZ31_12735 | Not Available | Negative | 2495293 - 2496690 | 51572.4 |
| trehalase | DIZ31_12740 | Not Available | Positive | 2497095 - 2498744 | 63727.1 |
| dna-binding response regulator | DIZ31_12745 | Not Available | Negative | 2498795 - 2499397 | 22614.6 |
| lysr family transcriptional regulator | DIZ31_12750 | Not Available | Positive | 2499917 - 2500816 | 33321.5 |
| mfs transporter | DIZ31_12760 | Not Available | Positive | 2502270 - 2503592 | 47213.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





