Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobilin reductase | DIZ31_12660 | Not Available | Positive | 2480275 - 2480898 | 21771.0 |
| iron abc transporter permease | DIZ31_12665 | Not Available | Positive | 2480983 - 2481939 | 34014.1 |
| hemin import atp-binding protein hmuv | DIZ31_12670 | Not Available | Positive | 2481936 - 2482706 | 28882.9 |
| mgtc/sapb family protein | DIZ31_12675 | Not Available | Negative | 2482758 - 2483405 | 23184.9 |
| acid stress chaperone hdeb | DIZ31_12680 | Not Available | Negative | 2483469 - 2483795 | 12043.5 |
| acid-activated periplasmic chaperone hdea | DIZ31_12685 | Not Available | Negative | 2483911 - 2484243 | 11831.2 |
| acid-resistance protein | DIZ31_12690 | Not Available | Positive | 2484498 - 2485070 | 20904.7 |
| transcriptional regulator gade | DIZ31_12695 | Not Available | Positive | 2485869 - 2486396 | 20600.6 |
| hypothetical protein | DIZ31_12700 | Not Available | Negative | 2486346 - 2486675 | 11627.0 |
| multidrug resistance protein mdte | DIZ31_12705 | Not Available | Positive | 2486735 - 2487892 | 41162.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





