Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsenate reductase (glutaredoxin) | DIZ31_12600 | Not Available | Positive | 2470837 - 2471262 | 15873.2 |
| outer membrane protein slp | DIZ31_12610 | Not Available | Positive | 2472448 - 2473014 | 20949.1 |
| dctr protein | DIZ31_12615 | Not Available | Positive | 2473055 - 2473228 | 6607.24 |
| helix-turn-helix transcriptional regulator | DIZ31_12620 | Not Available | Positive | 2473167 - 2473697 | 20422.5 |
| hemin-degrading factor | DIZ31_12625 | Not Available | Negative | 2473754 - 2474782 | 38612.8 |
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | DIZ31_12630 | Not Available | Negative | 2474831 - 2476813 | 72491.0 |
| hypothetical protein | DIZ31_12635 | Not Available | Positive | 2476719 - 2476910 | 7010.53 |
| hemin abc transporter substrate-binding protein | DIZ31_12645 | Not Available | Positive | 2477419 - 2478411 | 36131.8 |
| heme anaerobic degradation radical sam methyltransferase chuw/hutw | DIZ31_12650 | Not Available | Positive | 2478431 - 2479768 | 49617.2 |
| heme utilization cystosolic carrier protein hutx | DIZ31_12655 | Not Available | Positive | 2479781 - 2480275 | 18287.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





