Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage virion morphogenesis family protein | DIZ31_20860 | Not Available | Positive | 4017420 - 4017971 | 20597.5 |
| Protease (i) and scaffold (z) protein | DIZ31_20865 | Not Available | Positive | 4018181 - 4019296 | 39573.6 |
| Hypothetical protein | DIZ31_20870 | Not Available | Positive | 4019297 - 4019692 | 13509.7 |
| Putative major head subunit protein | DIZ31_20875 | Not Available | Positive | 4019703 - 4020611 | 33669.9 |
| Mu phage uncharacterized protein | DIZ31_20880 | Not Available | Positive | 4020615 - 4020956 | 12574.9 |
| Hypothetical protein | DIZ31_20885 | Not Available | Positive | 4020960 - 4021391 | 15956.8 |
| Mu-like prophage protein gp37 | DIZ31_20890 | Not Available | Positive | 4021388 - 4022026 | 23894.1 |
| Hypothetical protein | DIZ31_20895 | Not Available | Positive | 4022040 - 4022240 | 7475.72 |
| Tail sheath protein gpl | DIZ31_20900 | Not Available | Positive | 4022233 - 4023654 | 49692.4 |
| Tail tube protein | DIZ31_20905 | Not Available | Positive | 4023667 - 4024041 | 13779.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





