Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIZ31_12335 | Not Available | Positive | 2415404 - 2415760 | 14633.8 |
| phosphonate metabolism protein phnp | DIZ31_12340 | Not Available | Negative | 2415788 - 2416546 | 28007.4 |
| protein phno | DIZ31_12345 | Not Available | Negative | 2416548 - 2416982 | 16570.8 |
| ribose 1,5-bisphosphokinase | DIZ31_12350 | Not Available | Negative | 2416969 - 2417526 | 20760.9 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | DIZ31_12355 | Not Available | Negative | 2417526 - 2418662 | 42062.9 |
| phosphonate c-p lyase system protein phnl | DIZ31_12360 | Not Available | Negative | 2418659 - 2419339 | 24677.9 |
| phosphonate c-p lyase system protein phnk | DIZ31_12365 | Not Available | Negative | 2419450 - 2420208 | 27883.8 |
| carbon-phosphorus lyase complex subunit phnj | DIZ31_12370 | Not Available | Negative | 2420205 - 2421050 | 31819.9 |
| carbon-phosphorus lyase complex subunit phni | DIZ31_12375 | Not Available | Negative | 2421043 - 2422107 | 39031.3 |
| phosphonate c-p lyase system protein phnh | DIZ31_12380 | Not Available | Negative | 2422107 - 2422691 | 21001.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





