Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIZ31_12100 | Not Available | Negative | 2385293 - 2385493 | 7208.85 |
| inhibitor of g-type lysozyme | DIZ31_12105 | Not Available | Positive | 2385522 - 2385923 | 14807.5 |
| hypothetical protein | DIZ31_12110 | Not Available | Negative | 2386026 - 2386394 | 13404.1 |
| hypothetical protein | DIZ31_12115 | Not Available | Negative | 2386547 - 2386774 | 8587.76 |
| septum site-determining protein minc | DIZ31_12120 | Not Available | Positive | 2386914 - 2387609 | 24762.9 |
| septum site-determining protein mind | DIZ31_12125 | Not Available | Positive | 2387633 - 2388445 | 29615.8 |
| cell division topological specificity factor | DIZ31_12130 | Not Available | Positive | 2388449 - 2388715 | 10235.5 |
| hypothetical protein | DIZ31_12150 | Not Available | Positive | 2389825 - 2389998 | 6568.22 |
| glycine zipper family protein | DIZ31_12155 | Not Available | Positive | 2390000 - 2390344 | 10807.6 |
| hypothetical protein | DIZ31_12160 | Not Available | Positive | 2390354 - 2390683 | 11852.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





