Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| modd protein | DIZ31_12000 | Not Available | Positive | 2366140 - 2366994 | 30554.9 |
| tonb-dependent receptor | DIZ31_12005 | Not Available | Positive | 2367020 - 2368990 | 73463.0 |
| glsb/yeaq/ymge family stress response membrane protein | DIZ31_12010 | Not Available | Negative | 2369040 - 2369294 | 8703.27 |
| flagellar brake protein | DIZ31_12015 | Not Available | Positive | 2369495 - 2370229 | 27843.8 |
| murein transglycosylase | DIZ31_12020 | Not Available | Negative | 2370231 - 2370842 | 22213.7 |
| hypothetical protein | DIZ31_12025 | Not Available | Negative | 2370781 - 2370969 | 7093.67 |
| muramoyltetrapeptide carboxypeptidase | DIZ31_12030 | Not Available | Positive | 2370942 - 2371856 | 33534.4 |
| k+/h+ antiporter nhap2 | DIZ31_12035 | Not Available | Positive | 2371951 - 2373687 | 62209.1 |
| alanine racemase | DIZ31_12040 | Not Available | Negative | 2373744 - 2374814 | 38904.0 |
| d-amino acid dehydrogenase small subunit | DIZ31_12045 | Not Available | Negative | 2374824 - 2376122 | 47479.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





