Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | DIZ31_11895 | Not Available | Positive | 2345677 - 2345946 | 9909.85 |
| hypothetical protein | DIZ31_11900 | Not Available | Positive | 2345958 - 2346485 | 20071.1 |
| acyl-coa dehydrogenase | DIZ31_11905 | Not Available | Positive | 2346500 - 2346859 | 12424.8 |
| hypothetical protein | DIZ31_11910 | Not Available | Positive | 2346890 - 2347225 | 12154.8 |
| hypothetical protein | DIZ31_11915 | Not Available | Positive | 2347292 - 2347537 | 8774.81 |
| hypothetical protein | DIZ31_11920 | Not Available | Negative | 2348105 - 2349991 | 70755.9 |
| hypothetical protein | DIZ31_11925 | Not Available | Negative | 2349993 - 2350508 | 19522.4 |
| hypothetical protein | DIZ31_11930 | Not Available | Negative | 2350505 - 2351632 | 42348.5 |
| rna-directed dna polymerase | DIZ31_11935 | Not Available | Negative | 2351879 - 2353636 | 67940.5 |
| hypothetical protein | DIZ31_11940 | Not Available | Negative | 2354207 - 2354446 | 8914.99 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





