Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucarate dehydratase | DIZ31_11740 | Not Available | Positive | 2306915 - 2308255 | 48838.4 |
| glucarate dehydratase | DIZ31_11745 | Not Available | Positive | 2308276 - 2309616 | 49123.9 |
| two-component sensor histidine kinase bara | DIZ31_11750 | Not Available | Negative | 2309847 - 2312603 | 102505.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DIZ31_11755 | Not Available | Positive | 2312660 - 2313961 | 48045.0 |
| gtp pyrophosphokinase | DIZ31_11760 | Not Available | Positive | 2314009 - 2316243 | 83880.4 |
| nucleoside triphosphate pyrophosphohydrolase | DIZ31_11765 | Not Available | Positive | 2316339 - 2317130 | 30395.9 |
| ctp synthetase | DIZ31_11770 | Not Available | Positive | 2317358 - 2318995 | 60377.7 |
| enolase | DIZ31_11775 | Not Available | Positive | 2319083 - 2320381 | 45657.6 |
| ygcg family protein | DIZ31_11780 | Not Available | Negative | 2320441 - 2321313 | 32119.3 |
| 7-carboxy-7-deazaguanine synthase quee | DIZ31_11790 | Not Available | Positive | 2321607 - 2322278 | 25031.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





