Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DIZ31_11585 | Not Available | Negative | 2277271 - 2278005 | 28669.6 |
| sensor histidine kinase | DIZ31_11590 | Not Available | Negative | 2278020 - 2279717 | 62679.3 |
| Trna-met | Not Available | Not Available | Positive | 2280091 - 2280167 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2280201 - 2280277 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2280311 - 2280387 | Not Available |
| murein transglycosylase a | DIZ31_11615 | Not Available | Positive | 2280596 - 2281693 | 40441.0 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | DIZ31_11620 | Not Available | Positive | 2281770 - 2282576 | 28562.6 |
| cysteine desulfurase sulfur acceptor subunit csde | DIZ31_11625 | Not Available | Negative | 2282627 - 2283070 | 15925.2 |
| cysteine desulfurase csda | DIZ31_11630 | Not Available | Negative | 2283070 - 2284275 | 43307.6 |
| ygdi/ygdr family lipoprotein | DIZ31_11635 | Not Available | Positive | 2284467 - 2284694 | 8174.67 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





