Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail/dna circulation protein | DIZ31_20610 | Not Available | Positive | 3977137 - 3978510 | 49549.5 |
| Tail protein | DIZ31_20615 | Not Available | Positive | 3978507 - 3979586 | 39205.0 |
| Baseplate assembly v family protein | DIZ31_20620 | Not Available | Positive | 3979586 - 3980134 | 19553.2 |
| Tail protein | DIZ31_20625 | Not Available | Positive | 3980131 - 3980559 | 16346.6 |
| Base plate j protein | DIZ31_20630 | Not Available | Positive | 3980546 - 3981604 | 38213.1 |
| Tail protein | DIZ31_20635 | Not Available | Positive | 3981595 - 3982179 | 21620.5 |
| Tail protein | DIZ31_20640 | Not Available | Positive | 3982183 - 3982479 | 10822.7 |
| Hypothetical protein | DIZ31_20795 | Not Available | Positive | 4008203 - 4008601 | 15081.4 |
| hypothetical protein | DIZ31_20800 | Not Available | Positive | 4008598 - 4009074 | 18658.5 |
| Mor transcription activator family protein | DIZ31_20805 | Not Available | Positive | 4009175 - 4009642 | 17319.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





