Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate/thiosulfate import atp-binding protein cysa | DIZ31_11385 | Not Available | Positive | 2240025 - 2241122 | 41063.3 |
| cysteine synthase b | DIZ31_11390 | Not Available | Positive | 2241257 - 2242168 | 32592.1 |
| hypothetical protein | DIZ31_11395 | Not Available | Negative | 2242171 - 2242539 | 13488.5 |
| pyridoxine kinase | DIZ31_11400 | Not Available | Positive | 2242644 - 2243495 | 30850.2 |
| glucose-specific phosphotransferase enzyme iia component | DIZ31_11405 | Not Available | Negative | 2243538 - 2244047 | 18252.1 |
| phosphoenolpyruvate--protein phosphotransferase | DIZ31_11410 | Not Available | Negative | 2244088 - 2245815 | 63551.6 |
| phosphocarrier protein hpr | DIZ31_11415 | Not Available | Negative | 2245860 - 2246117 | 9119.89 |
| cysteine synthase a | DIZ31_11420 | Not Available | Negative | 2246501 - 2247472 | 34491.7 |
| sulfate transporter cysz | DIZ31_11425 | Not Available | Negative | 2247657 - 2248418 | 29306.6 |
| cell division protein zipa | DIZ31_11430 | Not Available | Positive | 2248648 - 2249646 | 36997.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





