Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase cytochrome b556 subunit | DIZ31_11175 | Not Available | Positive | 2195993 - 2196382 | 14286.0 |
| succinate dehydrogenase hydrophobic membrane anchor subunit | DIZ31_11180 | Not Available | Positive | 2196376 - 2196723 | 12868.3 |
| succinate dehydrogenase flavoprotein subunit | DIZ31_11185 | Not Available | Positive | 2196723 - 2198489 | 64425.6 |
| succinate dehydrogenase iron-sulfur subunit | DIZ31_11190 | Not Available | Positive | 2198505 - 2199221 | 26785.4 |
| 2-oxoglutarate dehydrogenase e1 component | DIZ31_11195 | Not Available | Positive | 2199583 - 2202384 | 105098.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | DIZ31_11200 | Not Available | Positive | 2202399 - 2203616 | 44042.0 |
| adp-forming succinate--coa ligase subunit beta | DIZ31_11205 | Not Available | Positive | 2203710 - 2204876 | 41323.1 |
| succinyl-coa ligase subunit alpha | DIZ31_11210 | Not Available | Positive | 2204876 - 2205745 | 29779.3 |
| gntr family transcriptional regulator | DIZ31_11215 | Not Available | Negative | 2205849 - 2206571 | 28232.8 |
| pts 2-o-a-mannosyl-d-glycerate transporter subunit iiabc | DIZ31_11220 | Not Available | Positive | 2206740 - 2208656 | 67262.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





