Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | DIZ31_11125 | Not Available | Positive | 2187825 - 2188838 | 35637.1 |
| sdr family nad(p)-dependent oxidoreductase | DIZ31_11130 | Not Available | Positive | 2188850 - 2189605 | 26243.0 |
| hydrolase | DIZ31_11135 | Not Available | Positive | 2189620 - 2189931 | 11150.2 |
| hydrolase | DIZ31_11140 | Not Available | Positive | 2189931 - 2191127 | 43184.2 |
| c4-dicarboxylate abc transporter | DIZ31_11145 | Not Available | Positive | 2191155 - 2192123 | 36168.0 |
| trap transporter small permease | DIZ31_11150 | Not Available | Positive | 2192183 - 2192644 | 17028.8 |
| trap transporter large permease | DIZ31_11155 | Not Available | Positive | 2192644 - 2193954 | 46735.0 |
| citrate (si)-synthase | DIZ31_11160 | Not Available | Negative | 2194001 - 2195284 | 47931.6 |
| hypothetical protein | DIZ31_11165 | Not Available | Positive | 2195272 - 2195457 | 6817.23 |
| hypothetical protein | DIZ31_11170 | Not Available | Negative | 2195721 - 2195960 | 8730.59 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





