Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIZ31_10975 | Not Available | Positive | 2159256 - 2159582 | 12003.3 |
| transcriptional repressor | DIZ31_10980 | Not Available | Negative | 2159666 - 2160112 | 16795.8 |
| fur leader peptide | DIZ31_10985 | Not Available | Negative | 2160105 - 2160191 | 3108.72 |
| flavodoxin-1 | DIZ31_10990 | Not Available | Negative | 2160401 - 2160931 | 19737.9 |
| lexa regulated protein | DIZ31_10995 | Not Available | Negative | 2161071 - 2161364 | 11280.7 |
| esterase | DIZ31_11000 | Not Available | Negative | 2161504 - 2162268 | 28478.9 |
| replication initiation regulator seqa | DIZ31_11005 | Not Available | Positive | 2162453 - 2162998 | 20330.6 |
| phosphoglucomutase | DIZ31_11010 | Not Available | Positive | 2163024 - 2164664 | 58378.2 |
| putrescine-ornithine antiporter | DIZ31_11015 | Not Available | Negative | 2164721 - 2166040 | 46497.6 |
| ornithine decarboxylase spef | DIZ31_11020 | Not Available | Negative | 2166037 - 2168235 | 82534.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





