Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygiq family radical sam protein | DIZ31_10825 | Not Available | Negative | 2125015 - 2127234 | 83533.5 |
| fcd domain-containing protein | DIZ31_10830 | Not Available | Positive | 2127486 - 2128235 | 29181.9 |
| mannitol dehydrogenase family protein | DIZ31_10835 | Not Available | Positive | 2128558 - 2130030 | 54395.6 |
| galactonate oxidoreductase | DIZ31_10840 | Not Available | Positive | 2130027 - 2131043 | 36863.2 |
| ldh family oxidoreductase | DIZ31_10845 | Not Available | Positive | 2131054 - 2132064 | 36043.5 |
| trap transporter substrate-binding protein | DIZ31_10850 | Not Available | Positive | 2132137 - 2133120 | 36214.6 |
| trap transporter small permease | DIZ31_10855 | Not Available | Positive | 2133162 - 2133644 | 18192.2 |
| hypothetical protein | DIZ31_10860 | Not Available | Positive | 2133655 - 2134959 | 46165.5 |
| cell division protein ftsp | DIZ31_10865 | Not Available | Negative | 2135030 - 2136442 | 51834.1 |
| 1-acylglycerol-3-phosphate o-acyltransferase | DIZ31_10870 | Not Available | Negative | 2136517 - 2137254 | 27451.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





