Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transporter exbd | DIZ31_10775 | Not Available | Negative | 2116907 - 2117332 | 15527.9 |
| biopolymer transporter exbb | DIZ31_10780 | Not Available | Negative | 2117339 - 2118073 | 26289.0 |
| hypothetical protein | DIZ31_10785 | Not Available | Negative | 2118066 - 2118221 | 5991.37 |
| cystathionine beta-lyase | DIZ31_10790 | Not Available | Positive | 2118325 - 2119512 | 43200.8 |
| deda family general envelope maintenance protein yghb | DIZ31_10795 | Not Available | Positive | 2119652 - 2120311 | 24135.3 |
| arac family transcriptional regulator | DIZ31_10800 | Not Available | Negative | 2120351 - 2121307 | 36059.0 |
| alcohol dehydrogenase | DIZ31_10805 | Not Available | Positive | 2121444 - 2122607 | 42115.5 |
| 2,5-didehydrogluconate reductase dkga | DIZ31_10810 | Not Available | Positive | 2122712 - 2123539 | 31138.5 |
| duf3828 domain-containing protein | DIZ31_10815 | Not Available | Positive | 2123739 - 2124665 | 34998.0 |
| hypothetical protein | DIZ31_10820 | Not Available | Positive | 2124716 - 2124973 | 9527.61 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





