Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2655 domain-containing protein | DIZ31_10575 | Not Available | Negative | 2075359 - 2075679 | 12100.6 |
| ribonuclease e | DIZ31_10580 | Not Available | Positive | 2075814 - 2078392 | 97208.1 |
| is4 family transposase | DIZ31_10585 | Not Available | Negative | 2078393 - 2078611 | 8374.37 |
| glycolate permease glca | DIZ31_10590 | Not Available | Negative | 2078765 - 2080447 | 58969.7 |
| malate synthase g | DIZ31_10595 | Not Available | Negative | 2080802 - 2082973 | 80392.0 |
| protein glcg | DIZ31_10600 | Not Available | Negative | 2082995 - 2083399 | 13721.5 |
| glycolate oxidase iron-sulfur subunit | DIZ31_10605 | Not Available | Negative | 2083404 - 2084627 | 45116.8 |
| glycolate oxidase subunit glce | DIZ31_10610 | Not Available | Negative | 2084638 - 2085690 | 38357.3 |
| fad-binding oxidoreductase | DIZ31_10615 | Not Available | Negative | 2085690 - 2087189 | 53829.0 |
| transcriptional regulator glcc | DIZ31_10620 | Not Available | Positive | 2087440 - 2088204 | 28856.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





