Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter permease potc | DIZ31_10375 | Not Available | Positive | 2036547 - 2037341 | 29070.6 |
| spermidine/putrescine-binding periplasmic protein | DIZ31_10380 | Not Available | Positive | 2037338 - 2038384 | 38855.0 |
| duf3592 domain-containing protein | DIZ31_10385 | Not Available | Positive | 2038442 - 2038903 | 17464.0 |
| hypothetical protein | DIZ31_10390 | Not Available | Positive | 2038900 - 2039688 | 28812.4 |
| nad-dependent deacylase | DIZ31_10395 | Not Available | Negative | 2039826 - 2040647 | 30968.2 |
| n-acetylglucosamine kinase | DIZ31_10400 | Not Available | Negative | 2040663 - 2041574 | 33058.6 |
| lipoprotein-releasing abc transporter permease subunit lole | DIZ31_10405 | Not Available | Negative | 2041603 - 2042847 | 45312.9 |
| lipoprotein-releasing system atp-binding protein lold | DIZ31_10410 | Not Available | Negative | 2042847 - 2043548 | 25453.9 |
| lipoprotein-releasing system protein lolc | DIZ31_10415 | Not Available | Negative | 2043541 - 2044740 | 43266.5 |
| hypothetical protein | DIZ31_10420 | Not Available | Positive | 2045001 - 2046074 | 40855.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





