Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts n-acetylgalactosamine transporter subunit iib | DIZ31_10095 | Not Available | Negative | 1988795 - 1989268 | 17056.8 |
| tagatose-bisphosphate aldolase subunit kbaz | DIZ31_10100 | Not Available | Negative | 1989291 - 1990571 | 47135.0 |
| hypothetical protein | DIZ31_10105 | Not Available | Negative | 1990585 - 1990887 | 11268.0 |
| deor family transcriptional regulator | DIZ31_10110 | Not Available | Positive | 1990820 - 1991629 | 29574.3 |
| type ii toxin-antitoxin system yhav family toxin | DIZ31_10115 | Not Available | Negative | 1991684 - 1992148 | 17778.0 |
| antitoxin prlf | DIZ31_10120 | Not Available | Negative | 1992148 - 1992483 | 12322.6 |
| d-galactarate dehydratase | DIZ31_10125 | Not Available | Negative | 1992632 - 1994203 | 56390.9 |
| mfs transporter | DIZ31_10130 | Not Available | Positive | 1994578 - 1995912 | 48982.1 |
| 5-keto-4-deoxy-d-glucarate aldolase | DIZ31_10135 | Not Available | Positive | 1995928 - 1996698 | 27400.6 |
| 2-hydroxy-3-oxopropionate reductase | DIZ31_10140 | Not Available | Positive | 1996728 - 1997618 | 30645.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





