Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail protein | DIZ31_19800 | Not Available | Positive | 3850560 - 3851406 | 29205.3 |
| Hypothetical protein | DIZ31_20465 | Not Available | Positive | 3956898 - 3957068 | 6631.01 |
| Lygf | DIZ31_20470 | Not Available | Positive | 3957084 - 3957509 | 16518.0 |
| hypothetical protein | DIZ31_20475 | Not Available | Positive | 3957684 - 3958349 | 25866.8 |
| Host cell-killing modulation protein | DIZ31_20480 | Not Available | Positive | 3958530 - 3958742 | 7808.85 |
| hypothetical protein | DIZ31_20485 | Not Available | Negative | 3958784 - 3958963 | 6534.04 |
| Hypothetical protein | DIZ31_20490 | Not Available | Positive | 3958910 - 3959182 | 11157.2 |
| Hypothetical protein | DIZ31_20495 | Not Available | Positive | 3959184 - 3960176 | 37235.2 |
| Q antitermination protein | DIZ31_20500 | Not Available | Positive | 3960191 - 3960769 | 21772.4 |
| atp-binding protein | DIZ31_20505 | Not Available | Positive | 3960909 - 3962300 | 52211.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





