Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeca family protein | DIZ31_09795 | Not Available | Positive | 1929177 - 1929761 | 21475.2 |
| xaa-pro aminopeptidase | DIZ31_09800 | Not Available | Positive | 1929787 - 1931112 | 49785.1 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | DIZ31_09805 | Not Available | Positive | 1931109 - 1932287 | 42516.1 |
| fad-dependent 2-octaprenylphenol hydroxylase | DIZ31_09810 | Not Available | Positive | 1932310 - 1933512 | 44202.4 |
| aminomethyltransferase | DIZ31_09815 | Not Available | Positive | 1933960 - 1935054 | 40151.0 |
| glycine cleavage system protein h | DIZ31_09820 | Not Available | Positive | 1935078 - 1935467 | 13811.8 |
| aminomethyl-transferring glycine dehydrogenase | DIZ31_09825 | Not Available | Positive | 1935586 - 1938459 | 104297.0 |
| 6-phospho-beta-glucosidase | DIZ31_09830 | Not Available | Negative | 1938625 - 1940064 | 55239.5 |
| asch domain-containing protein | DIZ31_09835 | Not Available | Positive | 1940103 - 1940414 | 11964.1 |
| eama family transporter | DIZ31_09840 | Not Available | Positive | 1940551 - 1940944 | 14482.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





