Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIZ31_09735 | Not Available | Positive | 1922416 - 1922727 | 12250.8 |
| methylmalonyl-coa mutase | DIZ31_09740 | Not Available | Negative | 1922724 - 1923779 | 39089.8 |
| chromosome initiation inhibitor | DIZ31_09750 | Not Available | Negative | 1923982 - 1924875 | 33473.6 |
| hypothetical protein | DIZ31_09755 | Not Available | Positive | 1925016 - 1925246 | 8372.49 |
| ribose-5-phosphate isomerase | DIZ31_09760 | Not Available | Positive | 1925302 - 1925961 | 22861.8 |
| d-3-phosphoglycerate dehydrogenase | DIZ31_09765 | Not Available | Positive | 1926217 - 1927449 | 44178.4 |
| small toxic protein ibsc | DIZ31_09770 | Not Available | Positive | 1927678 - 1927737 | 2209.04 |
| 5-formyltetrahydrofolate cyclo-ligase | DIZ31_09775 | Not Available | Negative | 1927838 - 1928440 | 23244.4 |
| cell division protein zapa | DIZ31_09785 | Not Available | Negative | 1928686 - 1929015 | 12594.9 |
| hypothetical protein | DIZ31_09790 | Not Available | Negative | 1928964 - 1929152 | 6833.36 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





