Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy-coupling factor transporter transmembrane protein ecft | DIZ31_09680 | Not Available | Negative | 1913368 - 1914075 | 26647.2 |
| ecf transporter s component | DIZ31_09685 | Not Available | Negative | 1914076 - 1914654 | 20238.9 |
| duf296 domain-containing protein | DIZ31_09690 | Not Available | Negative | 1914677 - 1915108 | 15551.9 |
| erythrose 4-phosphate dehydrogenase | DIZ31_09695 | Not Available | Positive | 1915425 - 1915526 | 4043.79 |
| d-erythrose-4-phosphate dehydrogenase | DIZ31_09700 | Not Available | Positive | 1915480 - 1916499 | 37301.5 |
| phosphoglycerate kinase | DIZ31_09705 | Not Available | Positive | 1916549 - 1917712 | 41120.5 |
| class ii fructose-bisphosphate aldolase | DIZ31_09710 | Not Available | Positive | 1917926 - 1919005 | 39177.4 |
| mechanosensitive ion channel protein mscs | DIZ31_09715 | Not Available | Positive | 1919196 - 1920056 | 30870.8 |
| arginine exporter protein argo | DIZ31_09720 | Not Available | Positive | 1920195 - 1920830 | 23175.0 |
| oxidative stress defense protein | DIZ31_09725 | Not Available | Positive | 1920923 - 1921663 | 26613.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





