Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prohibitin family protein | DIZ31_09630 | Not Available | Negative | 1905420 - 1906328 | 33052.9 |
| hypothetical protein | DIZ31_09635 | Not Available | Negative | 1906408 - 1906605 | 7804.73 |
| pts mannitol transporter subunit iia | DIZ31_09640 | Not Available | Positive | 1906706 - 1907149 | 16046.3 |
| pts mannitol transporter subunit iicba | DIZ31_09645 | Not Available | Positive | 1907177 - 1908565 | 49068.2 |
| l-sorbose 1-phosphate reductase | DIZ31_09650 | Not Available | Positive | 1908580 - 1909857 | 45895.2 |
| fructose-bisphosphatase class ii | DIZ31_09655 | Not Available | Positive | 1909854 - 1910819 | 34323.5 |
| transcriptional regulator | DIZ31_09660 | Not Available | Positive | 1910841 - 1911350 | 19292.9 |
| nucleoside/nucleotide kinase family protein | DIZ31_09665 | Not Available | Positive | 1911347 - 1912060 | 26815.2 |
| abc transporter atp-binding protein | DIZ31_09670 | Not Available | Negative | 1912032 - 1912709 | 24892.9 |
| cobalt abc transporter atp-binding protein | DIZ31_09675 | Not Available | Negative | 1912703 - 1913380 | 25082.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





