Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(46)-n7)-methyltransferase trmb | DIZ31_09480 | Not Available | Positive | 1877912 - 1878631 | 27308.9 |
| duf469 domain-containing protein | DIZ31_09485 | Not Available | Positive | 1878631 - 1878957 | 12823.2 |
| duf2884 domain-containing protein | DIZ31_09490 | Not Available | Positive | 1879141 - 1879860 | 26430.8 |
| l-asparaginase 2 | DIZ31_09495 | Not Available | Positive | 1880036 - 1881082 | 36851.7 |
| duf1202 domain-containing protein | DIZ31_09500 | Not Available | Positive | 1881199 - 1882206 | 38506.4 |
| hypothetical protein | DIZ31_09505 | Not Available | Negative | 1882262 - 1883563 | 45796.4 |
| trap transporter small permease | DIZ31_09510 | Not Available | Negative | 1883563 - 1884075 | 18665.8 |
| trap transporter substrate-binding protein | DIZ31_09515 | Not Available | Negative | 1884111 - 1885097 | 36453.7 |
| yggw family oxidoreductase | DIZ31_09520 | Not Available | Negative | 1885412 - 1886548 | 42601.6 |
| non-canonical purine ntp pyrophosphatase | DIZ31_09525 | Not Available | Negative | 1886541 - 1887134 | 20997.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





