Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc transporter zupt | DIZ31_09430 | Not Available | Negative | 1869528 - 1870295 | 26268.2 |
| Trna-phe | Not Available | Not Available | Positive | 1870329 - 1870404 | Not Available |
| duf554 domain-containing protein | DIZ31_09440 | Not Available | Negative | 1870510 - 1871217 | 24645.5 |
| hypothetical protein | DIZ31_09445 | Not Available | Positive | 1871332 - 1871529 | 7312.93 |
| ornithine decarboxylase | DIZ31_09450 | Not Available | Positive | 1871610 - 1873745 | 79479.7 |
| nucleoside permease | DIZ31_09455 | Not Available | Negative | 1873794 - 1875050 | 46378.9 |
| lytic murein transglycosylase | DIZ31_09460 | Not Available | Negative | 1875252 - 1876331 | 40114.8 |
| fe(2+)-trafficking protein | DIZ31_09465 | Not Available | Negative | 1876396 - 1876671 | 10953.2 |
| adenine dna glycosylase | DIZ31_09470 | Not Available | Negative | 1876699 - 1877751 | 39255.3 |
| adenine glycosylase | DIZ31_09475 | Not Available | Negative | 1877705 - 1877842 | 4915.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





