Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | DIZ31_09330 | Not Available | Positive | 1849955 - 1850323 | 13620.2 |
| undecaprenyl-diphosphate phosphatase | DIZ31_09335 | Not Available | Positive | 1850414 - 1851235 | 29801.7 |
| multifunctional cca addition/repair protein | DIZ31_09340 | Not Available | Negative | 1851315 - 1852553 | 46515.8 |
| sh3 domain-containing protein | DIZ31_09345 | Not Available | Negative | 1852617 - 1853237 | 23176.9 |
| hypothetical protein | DIZ31_09350 | Not Available | Positive | 1853277 - 1853462 | 6902.67 |
| inorganic triphosphatase | DIZ31_09355 | Not Available | Positive | 1853479 - 1854780 | 48619.0 |
| bifunctional | DIZ31_09360 | Not Available | Positive | 1854803 - 1857643 | 108321.0 |
| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase | DIZ31_09365 | Not Available | Positive | 1857691 - 1859124 | 51038.6 |
| type i toxin-antitoxin system ibs family toxin | DIZ31_09370 | Not Available | Negative | 1859244 - 1859303 | 2241.07 |
| hypothetical protein | DIZ31_09375 | Not Available | Positive | 1859284 - 1859481 | 7092.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





