Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma | DIZ31_09275 | Not Available | Negative | 1841556 - 1841678 | 4564.46 |
| dna primase | DIZ31_09280 | Not Available | Negative | 1841692 - 1843437 | 65598.6 |
| 30s ribosomal protein s21 | DIZ31_09285 | Not Available | Negative | 1843548 - 1843763 | 8500.42 |
| hypothetical protein | DIZ31_09290 | Not Available | Positive | 1843762 - 1843992 | 8737.95 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DIZ31_09295 | Not Available | Positive | 1844001 - 1845014 | 36068.5 |
| anion permease | DIZ31_09300 | Not Available | Negative | 1845057 - 1846520 | 52908.6 |
| l(+)-tartrate dehydratase subunit beta | DIZ31_09305 | Not Available | Negative | 1846568 - 1847173 | 22680.8 |
| l(+)-tartrate dehydratase subunit alpha | DIZ31_09310 | Not Available | Negative | 1847170 - 1848081 | 32663.5 |
| transcriptional activator ttdr | DIZ31_09320 | Not Available | Positive | 1848288 - 1849220 | 35286.6 |
| glycerol-3-phosphate acyltransferase | DIZ31_09325 | Not Available | Negative | 1849233 - 1849850 | 22194.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





