Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| addiction module toxin rele | DIZ31_09170 | Not Available | Positive | 1820156 - 1820395 | 9098.2 |
| mrna interferase higb | DIZ31_09175 | Not Available | Positive | 1820337 - 1820651 | 12103.7 |
| type ii toxin-antitoxin system higa family antitoxin | DIZ31_09180 | Not Available | Positive | 1820648 - 1821064 | 15024.3 |
| nadph-dependent 2,4-dienoyl-coa reductase | DIZ31_09185 | Not Available | Negative | 1821109 - 1823127 | 72675.6 |
| alpha-glucosidase | DIZ31_09190 | Not Available | Negative | 1823353 - 1825704 | 88574.0 |
| protein ygjj | DIZ31_09195 | Not Available | Negative | 1825721 - 1826791 | 40289.8 |
| amino acid permease | DIZ31_09200 | Not Available | Negative | 1826925 - 1828358 | 52175.7 |
| evolved beta-galactosidase subunit beta | DIZ31_09205 | Not Available | Negative | 1828421 - 1828870 | 17457.6 |
| beta-galactosidase subunit alpha | DIZ31_09210 | Not Available | Negative | 1828867 - 1831959 | 117873.0 |
| transcriptional regulator ebgr | DIZ31_09215 | Not Available | Negative | 1832143 - 1833126 | 36252.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





