Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-flavin reductase | DIZ31_09010 | Not Available | Positive | 1789307 - 1790008 | 26243.5 |
| acetyl-coa c-acyltransferase fada | DIZ31_09015 | Not Available | Negative | 1790189 - 1791352 | 40825.6 |
| fatty acid oxidation complex subunit alpha fadb | DIZ31_09020 | Not Available | Negative | 1791362 - 1793551 | 79553.5 |
| xaa-pro dipeptidase | DIZ31_09025 | Not Available | Positive | 1793741 - 1795072 | 50178.9 |
| impact family protein | DIZ31_09030 | Not Available | Positive | 1795072 - 1795686 | 21690.0 |
| trk system potassium transporter trkh | DIZ31_09035 | Not Available | Positive | 1795725 - 1797176 | 52948.8 |
| protoporphyrinogen oxidase | DIZ31_09040 | Not Available | Positive | 1797188 - 1797733 | 21227.4 |
| serine dehydratase subunit alpha family protein | DIZ31_09050 | Not Available | Positive | 1798911 - 1800221 | 45306.7 |
| hypothetical protein | DIZ31_09055 | Not Available | Negative | 1800282 - 1800446 | 5935.07 |
| pirin family protein | DIZ31_09060 | Not Available | Negative | 1800469 - 1801170 | 25971.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





