Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2877 domain-containing protein | DIZ31_08910 | Not Available | Negative | 1770796 - 1771656 | 31925.3 |
| cysteine hydrolase | DIZ31_08915 | Not Available | Negative | 1771662 - 1772330 | 24079.1 |
| dienelactone hydrolase family protein | DIZ31_08920 | Not Available | Negative | 1772587 - 1773396 | 29326.6 |
| uridine phosphorylase | DIZ31_08925 | Not Available | Positive | 1773658 - 1774422 | 27288.8 |
| c4-dicarboxylate abc transporter permease | DIZ31_08930 | Not Available | Negative | 1774457 - 1775947 | 51795.2 |
| tripartite tricarboxylate transporter tctb family protein | DIZ31_08935 | Not Available | Negative | 1775960 - 1776466 | 18051.8 |
| tripartite tricarboxylate transporter substrate binding protein | DIZ31_08940 | Not Available | Negative | 1776483 - 1777457 | 34173.5 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | DIZ31_08945 | Not Available | Negative | 1777482 - 1778111 | 22292.3 |
| carbohydrate kinase | DIZ31_08950 | Not Available | Negative | 1778101 - 1779105 | 36412.6 |
| iclr family transcriptional regulator | DIZ31_08955 | Not Available | Negative | 1779129 - 1779896 | 28298.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





