Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIZ31_08555 | Not Available | Positive | 1700268 - 1700465 | 7730.29 |
| ammonia-forming cytochrome c nitrite reductase subunit c552 | DIZ31_08560 | Not Available | Positive | 1700386 - 1701822 | 53678.6 |
| cytochrome c nitrite reductase pentaheme subunit | DIZ31_08565 | Not Available | Positive | 1701867 - 1702433 | 20657.6 |
| cytochrome c nitrite reductase fe-s protein | DIZ31_08570 | Not Available | Positive | 1702430 - 1703101 | 24590.8 |
| cytochrome c nitrite reductase subunit nrfd | DIZ31_08575 | Not Available | Positive | 1703098 - 1704054 | 35053.4 |
| heme lyase ccmf/nrfe family subunit | DIZ31_08580 | Not Available | Positive | 1704074 - 1705792 | 63665.3 |
| heme lyase nrfefg subunit nrff | DIZ31_08585 | Not Available | Positive | 1705785 - 1706168 | 14589.0 |
| heme lyase nrfefg subunit nrfg | DIZ31_08590 | Not Available | Positive | 1706165 - 1706761 | 22814.5 |
| hypothetical protein | DIZ31_08595 | Not Available | Negative | 1706999 - 1707190 | 7230.62 |
| glutamate/aspartate:proton symporter gltp | DIZ31_08600 | Not Available | Positive | 1707104 - 1708417 | 47166.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





