Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoyl dehydrogenase | DIZ31_08405 | Not Available | Positive | 1671793 - 1673211 | 49871.3 |
| adp-forming succinate--coa ligase subunit beta | DIZ31_08410 | Not Available | Positive | 1673233 - 1674402 | 42282.2 |
| succinate--coa ligase subunit alpha | DIZ31_08415 | Not Available | Positive | 1674415 - 1675287 | 30673.3 |
| hypothetical protein | DIZ31_08420 | Not Available | Positive | 1675499 - 1676998 | 52778.6 |
| ldh family oxidoreductase | DIZ31_08425 | Not Available | Positive | 1677010 - 1678083 | 38309.8 |
| sigma-54-dependent fis family transcriptional regulator | DIZ31_08430 | Not Available | Negative | 1678072 - 1679430 | 51090.0 |
| sensor histidine kinase | DIZ31_08435 | Not Available | Negative | 1679423 - 1681243 | 69235.1 |
| acid phosphatase apha | DIZ31_08440 | Not Available | Positive | 1681520 - 1682233 | 26076.9 |
| thiamine phosphate synthase | DIZ31_08445 | Not Available | Positive | 1682344 - 1682760 | 15626.7 |
| hypothetical protein | DIZ31_08450 | Not Available | Positive | 1682764 - 1683096 | 12679.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





