Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DIZ31_08155 | Not Available | Negative | 1618733 - 1619803 | 39432.1 |
| acp phosphodiesterase | DIZ31_08160 | Not Available | Positive | 1619896 - 1620477 | 23022.3 |
| maltodextrin glucosidase | DIZ31_08165 | Not Available | Negative | 1620482 - 1622296 | 69090.7 |
| proline-specific permease proy | DIZ31_08170 | Not Available | Negative | 1622455 - 1623828 | 50218.8 |
| branched-chain amino acid abc transporter substrate-binding protein | DIZ31_08175 | Not Available | Negative | 1623904 - 1625223 | 46225.5 |
| two-component system sensor histidine kinase phor | DIZ31_08180 | Not Available | Negative | 1625630 - 1626925 | 49647.4 |
| dna-binding response regulator | DIZ31_08185 | Not Available | Negative | 1626983 - 1627672 | 26435.0 |
| exonuclease subunit sbcd | DIZ31_08190 | Not Available | Positive | 1627862 - 1629064 | 44627.0 |
| exonuclease subunit sbcc | DIZ31_08195 | Not Available | Positive | 1629061 - 1632204 | 118603.0 |
| mfs transporter araj | DIZ31_08200 | Not Available | Positive | 1632330 - 1633514 | 41987.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





