Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6,7-dimethyl-8-ribityllumazine synthase | DIZ31_08105 | Not Available | Negative | 1609836 - 1610306 | 16157.4 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DIZ31_08110 | Not Available | Negative | 1610395 - 1611498 | 40396.7 |
| transcriptional regulator nrdr | DIZ31_08115 | Not Available | Negative | 1611502 - 1611951 | 17229.9 |
| hypothetical protein | DIZ31_08120 | Not Available | Positive | 1612102 - 1612641 | 19563.6 |
| nucleoside-specific channel-forming protein tsx | DIZ31_08125 | Not Available | Positive | 1612940 - 1613824 | 33625.6 |
| hnh endonuclease | DIZ31_08130 | Not Available | Negative | 1613862 - 1614209 | 13364.7 |
| protein translocase subunit secf | DIZ31_08135 | Not Available | Negative | 1614339 - 1615310 | 35384.6 |
| protein translocase subunit secd | DIZ31_08140 | Not Available | Negative | 1615321 - 1617168 | 66609.3 |
| preprotein translocase subunit yajc | DIZ31_08145 | Not Available | Negative | 1617196 - 1617528 | 11887.9 |
| trna guanosine(34) transglycosylase tgt | DIZ31_08150 | Not Available | Negative | 1617551 - 1618678 | 42596.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





