Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna--[protein]-cysteine s-methyltransferase | DIZ31_07905 | Not Available | Positive | 1568683 - 1569072 | 14407.4 |
| hypothetical protein | DIZ31_07910 | Not Available | Negative | 1569103 - 1569675 | 19442.3 |
| acyl-coa thioesterase ii | DIZ31_07915 | Not Available | Positive | 1569893 - 1570753 | 31954.1 |
| ammonium transporter amtb | DIZ31_07920 | Not Available | Negative | 1570802 - 1572088 | 44418.3 |
| nitrogen regulatory protein p-ii 2 | DIZ31_07925 | Not Available | Negative | 1572118 - 1572456 | 12259.9 |
| multidrug abc transporter permease/atp-binding protein | DIZ31_07930 | Not Available | Negative | 1572637 - 1574418 | 65232.5 |
| multidrug abc transporter permease/atp-binding protein | DIZ31_07935 | Not Available | Negative | 1574411 - 1576183 | 66097.6 |
| transcriptional regulator | DIZ31_07940 | Not Available | Negative | 1576213 - 1576671 | 17438.4 |
| hmp-pp phosphatase | DIZ31_07945 | Not Available | Negative | 1576824 - 1577642 | 30330.6 |
| sgrr family transcriptional regulator | DIZ31_07950 | Not Available | Positive | 1577742 - 1579442 | 64938.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





