Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate starvation-inducible protein phoh | DIZ31_07595 | Not Available | Positive | 1517567 - 1518631 | 39406.2 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | DIZ31_07600 | Not Available | Negative | 1518681 - 1519094 | 16134.8 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | DIZ31_07605 | Not Available | Negative | 1519096 - 1520421 | 50697.5 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | DIZ31_07610 | Not Available | Negative | 1520414 - 1522432 | 77322.8 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | DIZ31_07615 | Not Available | Negative | 1522441 - 1524864 | 92468.2 |
| ggdef domain-containing protein | DIZ31_07620 | Not Available | Positive | 1525450 - 1526817 | 52020.9 |
| Trna-ser | Not Available | Not Available | Positive | 1526922 - 1527009 | Not Available |
| glyoxylate/hydroxypyruvate reductase a | DIZ31_07630 | Not Available | Positive | 1527243 - 1528181 | 35340.4 |
| phosphatase | DIZ31_07635 | Not Available | Positive | 1528236 - 1528973 | 26860.0 |
| chaperone protein ycdy | DIZ31_07640 | Not Available | Positive | 1528997 - 1529551 | 20725.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





