Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIZ31_06775 | Not Available | Positive | 1337565 - 1337876 | 11220.7 |
| peptidase | DIZ31_06780 | Not Available | Negative | 1338382 - 1339743 | 51182.1 |
| duf1508 domain-containing protein | DIZ31_06785 | Not Available | Negative | 1339890 - 1340222 | 11994.9 |
| dna-binding response regulator | DIZ31_06790 | Not Available | Negative | 1340402 - 1341124 | 27657.5 |
| two-component system sensor histidine kinase baes | DIZ31_06795 | Not Available | Negative | 1341121 - 1342524 | 52115.5 |
| mfs transporter | DIZ31_06800 | Not Available | Negative | 1342521 - 1343936 | 50838.1 |
| multidrug resistance protein mdtc | DIZ31_06805 | Not Available | Negative | 1343937 - 1347014 | 110963.0 |
| multidrug resistance protein mdtb | DIZ31_06810 | Not Available | Negative | 1347015 - 1350137 | 112088.0 |
| multidrug transporter subunit mdta | DIZ31_06815 | Not Available | Negative | 1350137 - 1351384 | 44392.7 |
| type i toxin-antitoxin system ibs family toxin | DIZ31_06820 | Not Available | Positive | 1351663 - 1351719 | 2136.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





