Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fimbrial-like adhesin protein | DIZ31_06670 | Not Available | Positive | 1318793 - 1319827 | 36959.1 |
| nickel/cobalt homeostasis protein rcnb | DIZ31_06675 | Not Available | Negative | 1319909 - 1320247 | 12466.8 |
| nickel/cobalt efflux protein rcna | DIZ31_06680 | Not Available | Negative | 1320466 - 1321290 | 30475.2 |
| transcriptional regulator | DIZ31_06685 | Not Available | Positive | 1321411 - 1321683 | 10134.5 |
| hydroxyethylthiazole kinase | DIZ31_06690 | Not Available | Positive | 1321906 - 1322694 | 27328.7 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | DIZ31_06695 | Not Available | Positive | 1322691 - 1323491 | 28666.3 |
| glycoside hydrolase family 25 protein | DIZ31_06700 | Not Available | Positive | 1323556 - 1324374 | 31777.9 |
| gntr family transcriptional regulator | DIZ31_06705 | Not Available | Positive | 1324426 - 1325172 | 28280.8 |
| sugar kinase | DIZ31_06710 | Not Available | Negative | 1325146 - 1326111 | 34380.4 |
| adp-ribosylglycohydrolase family protein | DIZ31_06715 | Not Available | Negative | 1326108 - 1327112 | 35578.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





