Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIZ31_06610 | Not Available | Negative | 1305818 - 1306468 | 25299.5 |
| glycerophosphodiester phosphodiesterase | DIZ31_06615 | Not Available | Negative | 1306671 - 1307747 | 40886.6 |
| glycerol-3-phosphate transporter | DIZ31_06620 | Not Available | Negative | 1307752 - 1309110 | 50312.3 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit a | DIZ31_06625 | Not Available | Positive | 1309383 - 1311011 | 58943.8 |
| methionine--trna ligase | DIZ31_06635 | Not Available | Negative | 1311974 - 1312906 | 35626.1 |
| protein mrp | DIZ31_06640 | Not Available | Positive | 1313038 - 1314147 | 39940.4 |
| duf2574 domain-containing protein | DIZ31_06645 | Not Available | Positive | 1314410 - 1314691 | 10178.1 |
| hypothetical protein | DIZ31_06655 | Not Available | Positive | 1314984 - 1315526 | 19059.6 |
| fimbrial assembly protein | DIZ31_06660 | Not Available | Positive | 1315607 - 1316281 | 24803.3 |
| fimbrial biogenesis outer membrane usher protein | DIZ31_06665 | Not Available | Positive | 1316297 - 1318777 | 92397.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





