Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DIZ31_06295 | Not Available | Positive | 1233061 - 1234875 | 69783.7 |
| abc transporter permease | DIZ31_06300 | Not Available | Positive | 1234876 - 1235970 | 40362.6 |
| abc transporter permease | DIZ31_06305 | Not Available | Positive | 1235970 - 1236995 | 38108.7 |
| microcin c abc transporter atp-binding protein yejf | DIZ31_06310 | Not Available | Positive | 1236997 - 1238586 | 58656.7 |
| hypothetical protein | DIZ31_06315 | Not Available | Negative | 1238590 - 1238934 | 12525.9 |
| bcr/cfla family drug resistance efflux transporter | DIZ31_06325 | Not Available | Negative | 1239268 - 1240458 | 43369.4 |
| 16s rrna pseudouridine(516) synthase | DIZ31_06330 | Not Available | Negative | 1240486 - 1241181 | 25866.8 |
| atp-dependent helicase | DIZ31_06340 | Not Available | Positive | 1241331 - 1243091 | 66462.9 |
| 50s ribosomal protein l25 | DIZ31_06345 | Not Available | Positive | 1243216 - 1243500 | 10693.1 |
| nucleoid-associated protein | DIZ31_06350 | Not Available | Negative | 1243639 - 1244646 | 37825.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





