Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter | DIZ31_06130 | Not Available | Negative | 1202783 - 1203673 | 31115.6 |
| tagatose bisphosphate family class ii aldolase | DIZ31_06135 | Not Available | Negative | 1203709 - 1204563 | 31343.5 |
| deor/glpr transcriptional regulator | DIZ31_06140 | Not Available | Positive | 1204904 - 1205734 | 30482.7 |
| sugar kinase | DIZ31_06145 | Not Available | Positive | 1205766 - 1206701 | 34200.1 |
| duf997 domain-containing protein | DIZ31_06150 | Not Available | Positive | 1206794 - 1207036 | 9136.3 |
| sodium/panthothenate symporter | DIZ31_06155 | Not Available | Positive | 1207026 - 1208477 | 51734.3 |
| 50s ribosomal protein l11 methyltransferase | DIZ31_06160 | Not Available | Positive | 1208489 - 1209370 | 31878.8 |
| trna dihydrouridine synthase dusb | DIZ31_06165 | Not Available | Positive | 1209699 - 1210664 | 35868.2 |
| dna-binding transcriptional regulator fis | DIZ31_06170 | Not Available | Positive | 1210690 - 1210986 | 11240.6 |
| adenine-specific dna-methyltransferase | DIZ31_06175 | Not Available | Positive | 1211071 - 1211955 | 33375.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





